Research in Observations of Oceanic Air/Sea Interaction

The primary purpose of this research has been: (1) to develop an innovative research radar scatterometer system capable of directly measuring both the radar backscatter and the small-scale and large-scale ocean wave field simultaneously and (2) deploy this instrument to collect data to support studies of air/sea interaction. The instrument has been successfully completed and deployed. The system deployment lasted for six months during 1995. Results to date suggest that the data is remarkably useful in air/sea interaction studies. While the data analysis is continuing, two journal and fifteen conference papers have been published. Six papers are currently in review with two additional journal papers scheduled for publication. Three Master's theses on this research have been completed. A Ph.D. student is currently finalizing his dissertation which should be completed by the end of the calendar year. We have received additional 'mainstream' funding from the NASA oceans branch to continue data analysis and instrument operations. We are actively pursuing results from the data expect additional publications to follow. This final report briefly describes the instrument system we developed and results to-date from the deployment. Additional detail is contained in the attached papers selected from the bibliography

Viscosity of High Energy Nuclear Fluids

Relativistic high energy heavy ion collision cross sections have been interpreted in terms of almost ideal liquid droplets of nuclear matter. The experimental low viscosity of these nuclear fluids have been of considerable recent quantum chromodynamic interest. The viscosity is here discussed in terms of the string fragmentation models wherein the temperature dependence of the nuclear fluid viscosity obeys the Vogel-Fulcher-Tammann law.Comment: 6 pages, ReVTeX 4 format, two figures, *.eps forma

Remote sensing of Earth terrain

Remote sensing of earth terrain is examined. The layered random medium model is used to investigate the fully polarimetric scattering of electromagnetic waves from vegetation. The model is used to interpret the measured data for vegetation fields such as rice, wheat, or soybean over water or soil. Accurate calibration of polarimetric radar systems is essential for the polarimetric remote sensing of earth terrain. A polarimetric calibration algorithm using three arbitrary in-scene reflectors is developed. In the interpretation of active and passive microwave remote sensing data from the earth terrain, the random medium model was shown to be quite successful. A multivariate K-distribution is proposed to model the statistics of fully polarimetric radar returns from earth terrain. In the terrain cover classification using the synthetic aperture radar (SAR) images, the applications of the K-distribution model will provide better performance than the conventional Gaussian classifiers. The layered random medium model is used to study the polarimetric response of sea ice. Supervised and unsupervised classification procedures are also developed and applied to synthetic aperture radar polarimetric images in order to identify their various earth terrain components for more than two classes. These classification procedures were applied to San Francisco Bay and Traverse City SAR images

Dependence of the Normalized Radar Cross Section of Water Waves on Bragg Wavelength-Wind Speed Sensitivity

Measurements of the normalized radar cross section (sigma(sup o)) made by the YSCAT ultrawideband scatterometer during an extended deployment on the Canada Centre for Inland Waters(CCIW) Research Tower located at Lake Ontario are analyzed and compared with anemometer wind measurements to study the sensitivity of (sigma(sup o)) to the wind speed as a function of the Bragg wavelength. This paper concentrates on upwind and downwind azimuth angles in the wind speed range of 4.5-12 m/s. While YSCAT collected measurements of sigma(sup o) at a variety of frequencies and incidence angles, this paper focuses on frequencies of 2.0, 3.05, 5.30, 10.02, and 14.0 GHz and incidence angles within the Bragg regime, 30-50 deg. Adopting a power law model to describe the relationship between sigma(sup o) and wind speed, both wind speed exponents and upwind/downwind (u/d) ratios of sigma(sup o) are found using least squares linear regression. The analysis of the wind speed exponents and u/d ratios show that shorter Bragg wavelengths (Lambda less than 4 cm) are the most sensitive to wind speed and direction. Additionally, vertical polarization (V-pol) sigma(sup o) is shown to be more sensitive to wind speed than horizontal polarization (H-pol) sigma(sup o), while the H-pol u/d ratio is larger than the V-pol u/d ratio

Hierarchical galaxy formation and substructure in the Galaxy's stellar halo

We develop an explicit model for the formation of the stellar halo from tidally disrupted, accreted dwarf satellites in the cold dark matter (CDM) framework, focusing on predictions testable with the Sloan Digital Sky Survey (SDSS) and other wide-field surveys. Subhalo accretion and orbital evolution are calculated using a semi-analytic approach within the Press-Schechter formalism. Motivated by our previous work, we assume that low-mass subhalos (v < 30 km/s) can form significant populations of stars only if they accreted a substantial fraction of their mass before the epoch of reionization. With this assumption, the model reproduces the observed velocity function of galactic satellites in the Local Group, solving the ``dwarf satellite problem'' without modifying the popular LCDM cosmology. The disrupted satellites yield a stellar distribution with a total mass and radial density profile consistent with those observed for the Milky Way stellar halo. Most significantly, the model predicts the presence of many large-scale, coherent substructures in the outer halo. These substructures are remnants of individual, tidally disrupted dwarf satellite galaxies. Substructure is more pronounced at large galactocentric radii because of the smaller number density of tidal streams and the longer orbital times. This model provides a natural explanation for the coherent structures in the outer stellar halo found in the SDSS commissioning data, and it predicts that many more such structures should be found as the survey covers more of the sky. The detection (or non-detection) and characterization of such structures could eventually test variants of the CDM scenario, especially those that aim to solve the dwarf satellite problem by enhancing satellite disruption.Comment: 12 pages, 8 figures, Submitted to Ap

Beyond “Sicko”— Thoughts on Health System Reform

The documentary “Sicko” has reignited the debate on health care reform in the U.S. Michael Moore’s film raised no new issues, but put faces and stories to longstanding problems of access to health care in this country. With a presidential election looming next year, it is possible that the political and public will can be catalyzed to change the health care system. In this Issue Brief, we asked five LDI Senior Fellows to comment on some of the issues raised by “Sicko,” and to offer their thoughts on the prospects for health system reform

Identifying mRNA targets of microRNA dysregulated in cancer: with application to clear cell Renal Cell Carcinoma

BACKGROUND. MicroRNA regulate mRNA levels in a tissue specific way, either by inducing degradation of the transcript or by inhibiting translation or transcription. Putative mRNA targets of microRNA identified from seed sequence matches are available in many databases. However, such matches have a high false positive rate and cannot identify tissue specificity of regulation. RESULTS. We describe a simple method to identify direct mRNA targets of microRNA dysregulated in cancers from expression level measurements in patient matched tumor/normal samples. The word "direct" is used here in a strict sense to: a) represent mRNA which have an exact seed sequence match to the microRNA in their 3'UTR, b) the seed sequence match is strictly conserved across mouse, human, rat and dog genomes, c) the mRNA and microRNA expression levels can distinguish tumor from normal with high significance and d) the microRNA/mRNA expression levels are strongly and significantly anti-correlated in tumor and/or normal samples. We apply and validate the method using clear cell Renal Cell Carcinoma (ccRCC) and matched normal kidney samples, limiting our analysis to mRNA targets which undergo degradation of the mRNA transcript because of a perfect seed sequence match. Dysregulated microRNA and mRNA are first identified by comparing their expression levels in tumor vs normal samples. Putative dysregulated microRNA/mRNA pairs are identified from these using seed sequence matches, requiring that the seed sequence be conserved in human/dog/rat/mouse genomes. These are further pruned by requiring a strong anti-correlation signature in tumor and/or normal samples. The method revealed many new regulations in ccRCC. For instance, loss of miR-149, miR-200c and mir-141 causes gain of function of oncogenes (KCNMA1, LOX), VEGFA and SEMA6A respectively and increased levels of miR-142-3p, miR-185, mir-34a, miR-224, miR-21 cause loss of function of tumor suppressors LRRC2, PTPN13, SFRP1, ERBB4, and (SLC12A1, TCF21) respectively. We also found strong anti-correlation between VEGFA and the miR-200 family of microRNA: miR-200a*, 200b, 200c and miR-141. Several identified microRNA/mRNA pairs were validated on an independent set of matched ccRCC/normal samples. The regulation of SEMA6A by miR-141 was verified by a transfection assay. CONCLUSIONS. We describe a simple and reliable method to identify direct gene targets of microRNA in any cancer. The constraints we impose (strong dysregulation signature for microRNA and mRNA levels between tumor/normal samples, evolutionary conservation of seed sequence and strong anti-correlation of expression levels) remove spurious matches and identify a subset of robust, tissue specific, functional mRNA targets of dysregulated microRNA.Cancer Institute of New Jersy; New Jersey Commission for Cacner Research; Lineberger Comprehensive Cancer Center Tissue Procurement and Genomics Core Facility; Crawford Fun

The shocklet transform: a decomposition method for the identification of local, mechanism-driven dynamics in sociotechnical time series

We introduce a qualitative, shape-based, timescale-independent time-domain transform used to extract local dynamics from sociotechnical time series—termed the Discrete Shocklet Transform (DST)—and an associated similarity search routine, the Shocklet Transform And Ranking (STAR) algorithm, that indicates time windows during which panels of time series display qualitatively-similar anomalous behavior. After distinguishing our algorithms from other methods used in anomaly detection and time series similarity search, such as the matrix profile, seasonal-hybrid ESD, and discrete wavelet transform-based procedures, we demonstrate the DST’s ability to identify mechanism-driven dynamics at a wide range of timescales and its relative insensitivity to functional parameterization. As an application, we analyze a sociotechnical data source (usage frequencies for a subset of words on Twitter) and highlight our algorithms’ utility by using them to extract both a typology of mechanistic local dynamics and a data-driven narrative of socially-important events as perceived by English-language Twitter